Information for 2-AAGGACGTTC (Motif 6)

G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
Reverse Opposite:
A C T G C T G A G C T A A T G C A C T G C G A T A G T C G T A C G A C T A C G T
p-value:1e-28
log p-value:-6.530e+01
Information Content per bp:1.821
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets179.7 +/- 67.9bp
Average Position of motif in Background161.8 +/- 85.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ttk/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AAGGACGTTC
GCCAGGACCTCG
 A C G T A C G T G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
T C A G A T G C G T A C C T G A A C T G A C T G C G T A A G T C G T A C G A C T A G C T A C T G

FMR1(KH)/Drosophila_melanogaster-RNCMPT00015-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGGACGTTC
ANGGACA---
 G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
C G T A G A T C A C T G A C T G C G T A G A T C C T G A A C G T A C G T A C G T

Tb_0230(RRM)/Trypanosoma_brucei-RNCMPT00230-PBM/HughesRNA

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAGGACGTTC
AGAAGGAC----
 A C G T A C G T G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
C T G A A C T G C G T A C G T A A C T G A C T G C T G A T G A C A C G T A C G T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00110-PBM/HughesRNA

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGGACGTTC
CAGGACAN--
 G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
G T A C C G T A A C T G A C T G C G T A A T G C G T C A T G C A A C G T A C G T

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAGGACGTTC
TTAGGAC----
 A C G T G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
C G A T A G C T C G T A A C T G A C T G C G T A G A T C A C G T A C G T A C G T A C G T

ttk/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGGACGTTC
CAGGACC---
 G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
G T A C C T G A A C T G A C T G C G T A A G T C G T A C A C G T A C G T A C G T

ttk/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGGACGTTC
GCAGGACC---
 A C G T G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
A T C G G T A C C T G A A C T G A C T G C G T A A G T C G T A C A C G T A C G T A C G T

ANKHD1(KH)/Homo_sapiens-RNCMPT00002-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAGGACGTTC
--AGACGTA-
 G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
A C G T A C G T C G T A A C T G C G T A A G T C A C T G G C A T C G T A A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGGACGTTC
ANCAGGAAGT--
 A C G T A C G T G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T

RBM5(Znf)/Homo_sapiens-RNCMPT00055-PBM/HughesRNA

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAGGACGTTC
GAAGGAA----
 A C G T G T C A C G T A A C T G C T A G C G T A G T A C A T C G C G A T A G C T G T A C
C T A G C G T A C T G A A C T G A C T G C G T A C T G A A C G T A C G T A C G T A C G T