Information for 20-GCGTGACA (Motif 50)

A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C C G T A A G T C A C T G A G T C
p-value:1e-8
log p-value:-1.956e+01
Information Content per bp:1.530
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets192.5 +/- 80.0bp
Average Position of motif in Background175.8 +/- 74.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GCGTGACA
NCGTGACN
 A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGACA
TTGCGTGCVA
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

vis/MA0252.1/Jaspar

Match Rank:3
Score:0.78
Offset:3
Orientation:forward strand
Alignment:GCGTGACA-
---TGACAG
 A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A T C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCGTGACA
TGCGTG---
 A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

prd/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGACA----
AGCGTGACGGATT
 A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
C T G A A T C G A G T C A C T G A C G T T C A G C G T A G T A C A C T G T C A G C T G A C G A T A C G T

achi/MA0207.1/Jaspar

Match Rank:6
Score:0.76
Offset:3
Orientation:forward strand
Alignment:GCGTGACA-
---TGACAG
 A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C T A G

CG33714(RRM)/Drosophila_melanogaster-RNCMPT00009-PBM/HughesRNA

Match Rank:7
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GCGTGACA
NGGCGTG---
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A
A T C G A T C G A C T G A G T C A C T G A G C T A C T G A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GCGTGACA--
--TTGACAGG
 A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

hth/MA0227.1/Jaspar

Match Rank:9
Score:0.75
Offset:3
Orientation:forward strand
Alignment:GCGTGACA-
---TGACAG
 A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C T G A A C T G

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTGACA-
NNGTCGCGTGNCAC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G C G T A A G T C C G T A A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C