Information for 14-TCCCTACG (Motif 43)

A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T G T C A A C T G A C T G A T C G C G T A
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.910
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif27.5
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets179.7 +/- 102.2bp
Average Position of motif in Background169.3 +/- 96.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNRNPA2B1(RRM)/Homo_sapiens-RNCMPT00024-PBM/HughesRNA

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TCCCTACG
TCCCTAN-
 A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G
C G A T A G T C A G T C A G T C A C G T C G T A G T C A A C G T

HNRNPA1(RRM)/Homo_sapiens-RNCMPT00022-PBM/HughesRNA

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TCCCTACG
TCCCTAN-
 A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G
C G A T G T A C A G T C A G T C A C G T C G T A G T C A A C G T

HRB98DE(RRM)/Drosophila_melanogaster-RNCMPT00096-PBM/HughesRNA

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TCCCTACG
-CCCTACC
 A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G
A C G T A G T C A G T C A G T C C G A T C G T A G T A C A G T C

HNRNPA1L2(RRM)/Homo_sapiens-RNCMPT00023-PBM/HughesRNA

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TCCCTACG
TCCCTAA-
 A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G
C G A T G T A C A G T C A G T C A C G T C G T A G T C A A C G T

HRB87F(RRM)/Drosophila_melanogaster-RNCMPT00029-PBM/HughesRNA

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TCCCTACG
-CCCTACC
 A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G
A C G T A G T C A G T C A G T C C G A T C G T A G T A C A G T C

HRB98DE(RRM)/Drosophila_melanogaster-RNCMPT00095-PBM/HughesRNA

Match Rank:6
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TCCCTACG
-CCCTACC
 A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G
A C G T A G T C A G T C A G T C C G A T C G T A G T A C A G T C

MSI(RRM)/Drosophila_melanogaster-RNCMPT00100-PBM/HughesRNA

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TCCCTACG
-CCCTACT
 A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G
A C G T G A T C G T A C A G T C A C G T C G T A A G T C A C G T

SPL11/MA1056.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTACG---
NTCCGTACGNNN
 A C G T A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G A C G T A C G T A C G T
C T G A C G A T G T A C A G T C A C T G A C G T C G T A A G T C C T A G C T G A A C G T C G T A

HRB98DE(RRM)/Drosophila_melanogaster-RNCMPT00094-PBM/HughesRNA

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCCCTACG
-CCCTACC
 A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G
A C G T G T A C A G T C A G T C C G A T C G T A G T A C A G T C

SRP54(RRM)/Drosophila_melanogaster-RNCMPT00272-PBM/HughesRNA

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCCCTACG
TACCTAC-
 A C G T A T G C G T A C A G T C A C G T C G T A A G T C A C T G
A G C T G T C A A G T C A G T C A G C T G T C A G T A C A C G T