Information for 20-GARGGARAGA (Motif 41)

T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A
Reverse Opposite:
C G A T A G T C G C A T A G T C A C G T G T A C A G T C G A T C G A C T A T G C
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.651
Number of Target Sequences with motif2026.0
Percentage of Target Sequences with motif53.83%
Number of Background Sequences with motif3593.6
Percentage of Background Sequences with motif48.11%
Average Position of motif in Targets155.0 +/- 101.6bp
Average Position of motif in Background163.9 +/- 102.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: GA-repeat

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GARGGARAGA
GAGAGAGAGA
 T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A
C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T G A

BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GARGGARAGA---
TAGAGAGAGAGARAR
 A C G T A C G T T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A A C G T A C G T A C G T
C A G T G C T A A C T G C G T A A C T G C G T A A C T G C G T A C T A G C G T A C T A G C G T A C T G A C T G A C T A G

Trl/dmmpmm(Down)/fly

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GARGGARAGA--
GAGAGAGAGAGC
 T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A A C G T A C G T
T C A G T G C A T C A G G T C A C A T G T C G A T C A G G T C A C T A G T G C A C T A G G T A C

GAGA-repeat/SacCer-Promoters/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GARGGARAGA---
GAGAGAGARAGARAG
 A C G T A C G T T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A A C G T A C G T A C G T
C T A G T C G A C T A G T G C A T C A G C T G A C T A G C T G A C T A G T C G A C T A G C T G A C T A G C G T A C T A G

Trl/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GARGGARAGA----
GAGAGAGAGAGCAA
 T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A A C G T A C G T A C G T A C G T
T C A G T G C A T C A G G C T A A C T G T G C A T C A G C T G A C T A G G T C A C T A G G T A C T C G A C T G A

FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GARGGARAGA---
-RGAGAGAGAAAG
 T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A A C G T A C G T A C G T
A C G T C T A G C T A G T C G A C T A G C G T A A T C G T C G A A C T G C T G A T C G A C T G A T A C G

Trl/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GARGGARAGA----
-AGAGAGAGAGNAA
 T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A A C G T A C G T A C G T A C G T
A C G T G C T A T C A G C T G A C A T G T C G A T C A G G T C A A T C G G T C A T C A G T G C A G C T A C T G A

br-Z4/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GARGGARAGA
---AGAAACA
 T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A
A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A T C G C G T A

PCBP3(KH)/Mus_musculus-RNCMPT00215-PBM/HughesRNA

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GARGGARAGA
-AGGGAAAG-
 T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A
A C G T C G T A A C T G A C T G C T A G C G T A C G T A C T G A C A T G A C G T

RBM5(RRM)/Homo_sapiens-RNCMPT00154-PBM/HughesRNA

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GARGGARAGA
GAAGGAG---
 T A C G C T G A C T A G C T A G C A T G C G T A T C A G C G T A T C A G G C T A
A T C G C G T A T C G A A T C G A T C G C T G A C T A G A C G T A C G T A C G T