Information for 12-ACGTGAGC (Motif 40)

C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C C G T A A G T C A C T G C G A T
p-value:1e-12
log p-value:-2.882e+01
Information Content per bp:1.923
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif29.6
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets155.7 +/- 102.3bp
Average Position of motif in Background114.5 +/- 103.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TYE7/MA0409.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ACGTGAGC
CACGTGA--
 A C G T C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C
A G T C C G T A A G T C A T C G A C G T A C T G C G T A A C G T A C G T

TGA2/MA1068.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ACGTGAGC
ACGTCATC
 C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C
C T G A A G T C T C A G G C A T T G A C C T G A A C G T T A G C

CBF1/MA0281.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ACGTGAGC
GCACGTGA--
 A C G T A C G T C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C
C A T G A G T C C G T A A G T C A C T G A C G T A C T G G T C A A C G T A C G T

bZIP910(2)(bZIP)/Antirrhinum majus/AthaMap

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ACGTGAGC----
ACGTCAGCACCC
 C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G T A A G T C A C T G A C G T A G T C C G T A A C T G A T G C G C T A A G T C T A G C A G T C

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ACGTGAGC
CACGTGA--
 A C G T C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C
A G T C C T G A A G T C C T A G A G C T A C T G T G C A A C G T A C G T

TGA1a(bZIP)/Nicotiana tabacum/AthaMap

Match Rank:6
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ACGTGAGC
CTCACGTGAG-
 A C G T A C G T A C G T C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C
A T G C G A C T A T G C C G T A A G T C A C T G A C G T A T C G C G T A A T C G A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:7
Score:0.72
Offset:-9
Orientation:forward strand
Alignment:---------ACGTGAGC-----
GGAAGAGTCACGTGACCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C

bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ACGTGAGC-
GCCACGTCAGCA
 A C G T A C G T A C G T C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C A C G T
A C T G G T A C A G T C C G T A A G T C T A C G A C G T G T A C C G T A A C T G A G T C G C T A

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGAGC
NCACGTGACN
 A C G T A C G T C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

BIM1/MA0964.1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ACGTGAGC
GCACGTGACC
 A C G T A C G T C G T A A G T C A C T G A C G T C T A G C G T A A C T G A G T C
A C T G G T A C C T G A G A T C T C A G G A C T C A T G G T C A A G T C T A G C