Information for 3-AYAATYCTATAG (Motif 4)

G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G
Reverse Opposite:
G T A C G C A T G T C A C A G T C T G A C A T G C T A G G C T A C A G T C A G T T C A G C G A T
p-value:1e-31
log p-value:-7.178e+01
Information Content per bp:1.561
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets172.9 +/- 94.2bp
Average Position of motif in Background127.0 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AYAATYCTATAG
NNCNNAACAATTNT----
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AYAATYCTATAG
AACAAT-------
 A C G T G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MET28(MacIsaac)/Yeast

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AYAATYCTATAG
------CCACAG
 G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G

MET28/MA0332.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AYAATYCTATAG
------CCACAG
 G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G

XBP1(MacIsaac)/Yeast

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AYAATYCTATAG
----TCCTCGAG
 G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A C T A G T C C A T G C T G A T C A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AYAATYCTATAG
-TAATCCCN---
 G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AYAATYCTATAG--
AACAATAACATTGTT
 A C G T G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

AIL7(AP2EREBP)/colamp-AIL7-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AYAATYCTATAG-
KCACRAWTYYCGAGG
 A C G T A C G T G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G A C G T
C A T G G A T C C T G A G T A C C T A G C T G A G C T A G C A T G A T C G A T C A G T C C T A G C G T A C A T G C T A G

PLT1(AP2EREBP)/colamp-PLT1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AYAATYCTATAG-
GCACGAWTYCCGAGG
 A C G T A C G T G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G A C G T
C A T G G A T C C T G A A G T C C T A G C G T A G C T A G C A T G A T C G A T C A G T C C T A G C G T A C A T G C T A G

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AYAATYCTATAG
GTAAACAAT-------
 A C G T A C G T A C G T A C G T G C T A A G T C G T C A G T C A C G A T G A T C G T A C G A C T G T C A A C G T C G T A C A T G
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T