Information for 16-TTGAGAAGTA (Motif 37)

A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C G T A G T C A C G T A G T C C T G A C G T A
p-value:1e-13
log p-value:-3.027e+01
Information Content per bp:1.972
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets137.2 +/- 81.5bp
Average Position of motif in Background146.4 +/- 52.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTGAGAAGTA
TTTGAAAA---
 A C G T A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A
G C A T A C G T A C G T A T C G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

Su(H)/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGAGAAGTA
GAANGTGAGAACTA
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A
A T C G C G T A C G T A A C G T A C T G A C G T A C T G C T G A C T A G C G T A C G T A A G T C A G C T C G T A

RNP4F(RRM)/Drosophila_melanogaster-RNCMPT00060-PBM/HughesRNA

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGAGAAGTA
-AGAGAAG--
 A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A
A C G T C G T A A C T G C G T A A C T G C T G A C T G A C T A G A C G T A C G T

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTGAGAAGTA
---AGAAGGC
 A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A
A C G T A C G T A C G T C G T A A C T G C G T A C G T A C T A G T C A G G T A C

Tb_0230(RRM)/Trypanosoma_brucei-RNCMPT00230-PBM/HughesRNA

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTGAGAAGTA-
---AGAAGGAC
 A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A A C G T
A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C T G A C T G C T G A T G A C

Su(H)/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGAGAAGTA
ATGAGAA---
 A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A
C T A G A C G T A C T G C T A G A C T G C G T A C T A G A C G T A C G T A C G T

GAT1/MA0300.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGAGAAGTA
CCGATAAG--
 A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A
A G T C G A T C A C T G C G T A A C G T C G T A C G T A A T C G A C G T A C G T

GZF3/Literature(Harbison)/Yeast

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTGAGAAGTA
--GATAAG--
 A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A
A C G T A C G T A C T G C G T A A C G T C G T A C G T A A C T G A C G T A C G T

GZF3(MacIsaac)/Yeast

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTGAGAAGTA
--GATAAG--
 A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A
A C G T A C G T A C T G C G T A A C G T C G T A C G T A A C T G A C G T A C G T

z/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGAGAAGTA
TTGAGTGATT
 A C G T A G C T A C T G C G T A A C T G G T C A C G T A A C T G A C G T C G T A
C G A T A G C T C T A G C G T A C T A G G A C T A T C G T C G A C A G T G C A T