Information for 1-GGTATCTGGG (Motif 3)

A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G
Reverse Opposite:
A G T C A T G C A G T C C T G A A C T G G T C A A C G T C G T A A T G C A G T C
p-value:1e-31
log p-value:-7.178e+01
Information Content per bp:1.878
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets182.2 +/- 79.2bp
Average Position of motif in Background171.8 +/- 47.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGTATCTGGG---
NNNGTAACTANGNNA
 A C G T A C G T A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGTATCTGGG--
--WDNCTGGGCA
 A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G A C G T A C G T
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

CG14718(RRM)/Drosophila_melanogaster-RNCMPT00006-PBM/HughesRNA

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGTATCTGGG
-NCATCTGG-
 A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G
A C G T A T C G T A G C G T C A A C G T A G T C A C G T A C T G A C T G A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGTATCTGGG---
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

MYB17(MYB)/colamp-MYB17-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTATCTGGG
GGTAGGTGRG
 A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G
C T A G C A T G G A C T C G T A C T A G A C T G A C G T C T A G C T A G T C A G

ARR18/MA0948.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTATCTGGG-
NNCGTATCTNNNN
 A C G T A C G T A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G A C G T
C G T A A G C T A G T C C T A G C G A T C G T A A C G T A T G C C G A T G C A T A C T G C G T A A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGTATCTGGG--
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTATCTGGG
ADAAATATCT---
 A C G T A C G T A C G T A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G
C G T A C G A T C G T A T C G A T C G A A C G T C G T A A C G T A G T C G C A T A C G T A C G T A C G T

CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGTATCTGGG
AAARATATCT---
 A C G T A C G T A C G T A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G
G T C A C T G A C T G A T C G A C T G A A C G T C G T A A C G T A G T C G A C T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGTATCTGGG
YSTTATCT---
 A C G T A C T G A T C G A C G T C G T A A C G T A G T C A G C T A C T G A T C G A C T G
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T