Information for 18-MTWTMTAWATMW (Motif 28)

T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T
Reverse Opposite:
C G T A A C T G G T C A C G A T C G T A G C A T C T G A A C G T G C T A C G A T C G T A A C G T
p-value:1e-15
log p-value:-3.681e+01
Information Content per bp:1.558
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets67.1 +/- 62.9bp
Average Position of motif in Background149.5 +/- 159.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---MTWTMTAWATMW-
TCTTTATATATAAATA
 A C G T A C G T A C G T T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

SeqBias: TA-repeat

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:MTWTMTAWATMW
-TATATATATA-
 T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T
A C G T C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T

RBMS3(RRM)/Homo_sapiens-RNCMPT00057-PBM/HughesRNA

Match Rank:3
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:MTWTMTAWATMW
---TATATAT--
 T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T
A C G T A C G T A C G T A C G T T G C A A C G T C G T A A C G T C T G A A C G T A C G T A C G T

TATA-box/SacCer-Promoters/Homer

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-MTWTMTAWATMW
BBHWTATATA---
 A C G T T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T
A G T C A G T C G A C T G C A T A G C T C G T A A C G T C G T A G C A T G T C A A C G T A C G T A C G T

SPT15/MA0386.1/Jaspar

Match Rank:5
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----MTWTMTAWATMW----
NNNNAATATATATANCTANNN
 A C G T A C G T A C G T A C G T A C G T T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T A C G T A C G T A C G T A C G T
G T C A C G A T A G T C A T C G G C T A G C T A G C A T C G T A G C A T G C T A G C A T G T C A G C A T C G T A G A C T A G T C G C A T C T G A C T A G C G A T A G T C

RBMS3(RRM)/Homo_sapiens-RNCMPT00173-PBM/HughesRNA

Match Rank:6
Score:0.75
Offset:3
Orientation:forward strand
Alignment:MTWTMTAWATMW
---TATATAN--
 T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T
A C G T A C G T A C G T G A C T C G T A A C G T C G T A C G A T C G T A A T C G A C G T A C G T

TBP(- other)/several species/AthaMap

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-MTWTMTAWATMW
GGTATTTATAGN-
 A C G T T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T
A C T G T A C G G A C T C G T A G A C T C G A T A C G T C T G A C G A T C G T A C A T G C G A T A C G T

NHP6A/MA0345.1/Jaspar

Match Rank:8
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----MTWTMTAWATMW----
ATGACCTATATATAAAAATGA
 A C G T A C G T A C G T A C G T A C G T T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T A C G T A C G T A C G T A C G T
T G C A G C A T C A T G G C T A G T A C G A T C G C A T G T C A G C A T C G T A G C A T C G T A G C A T C G T A C G T A C G T A C G T A C G T A G C A T C T A G G T C A

Cf2/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:MTWTMTAWATMW
-TATATATAC--
 T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T
A C G T A G C T C T G A G A C T C T G A A G C T T C G A A G C T C T G A A G T C A C G T A C G T

Cf2/MA0015.1/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:MTWTMTAWATMW
NTATATATAC--
 T G C A G C A T G C T A C G A T T G C A G A C T C G T A G C A T G C T A C A G T T G A C G C A T
T C A G G A C T C T G A A G C T C T G A A C G T T C G A A G C T C T G A A G T C A C G T A C G T