Information for 17-CWGCAGCARCAR (Motif 25)

G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G
Reverse Opposite:
A G T C G C A T A C T G A G T C C G A T T A C G T A G C G C A T T A C G A G T C C G T A C A T G
p-value:1e-16
log p-value:-3.755e+01
Information Content per bp:1.565
Number of Target Sequences with motif1486.0
Percentage of Target Sequences with motif39.48%
Number of Background Sequences with motif2465.5
Percentage of Background Sequences with motif33.01%
Average Position of motif in Targets179.6 +/- 92.7bp
Average Position of motif in Background160.0 +/- 94.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: GCW-triplet

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CWGCAGCARCAR
GCAGCAGCAGCA-
 A C G T G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G
A C T G A G T C C G A T A C T G A G T C C G A T A C T G A G T C C G A T A C T G A G T C C G A T A C G T

Adf1/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CWGCAGCARCAR
NACAGAAGCAGC--
 A C G T A C G T G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G
C A G T C T A G A G T C C T A G A C T G G T A C C T A G A C T G A T C G C G T A A C T G A G T C A C G T A C G T

CUP2/MA0287.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CWGCAGCARCAR--
---CAGCAAAAATG
 G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G A C G T A C G T
A C G T A C G T A C G T A G T C C G T A A C T G G T A C C T G A T C A G C G T A C G T A C T G A C G A T C T A G

odd/MA0454.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CWGCAGCARCAR
-AACAGTAGCAG
 G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G
A C G T G T C A G T C A A T G C C T G A A C T G A C G T C G T A A C T G A G T C T G C A T C A G

SRSF9(RRM)/Homo_sapiens-RNCMPT00074-PBM/HughesRNA

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CWGCAGCARCAR
----AGGAGCA-
 G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G
A C G T A C G T A C G T A C G T C G T A C A T G C T A G C G T A T A C G G T A C C T G A A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CWGCAGCARCAR
CAGCTGNT----
 G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

odd/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CWGCAGCARCAR
-AACAGTAGCA-
 G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G
A C G T G T C A T G C A A G T C T C G A C T A G C A G T C G T A A C T G A G T C T G C A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CWGCAGCARCAR
CACAGCAGGGGG--
 A C G T A C G T G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CWGCAGCARCAR
-TGCAGGNA---
 G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G
A C G T A G C T C T A G G T A C C T G A A C T G T A C G T G C A T C G A A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CWGCAGCARCAR
ATTTACAGTAGCAAAA-
 A C G T A C G T A C G T A C G T A C G T G T A C G C A T T C A G A T G C C G T A A T C G A T G C G C T A T C A G T G A C C G T A T C A G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T