Information for 7-CGATTCTTGC (Motif 21)

A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A C T A G C G T A C T G A A G C T A T G C A C T G
p-value:1e-18
log p-value:-4.318e+01
Information Content per bp:1.828
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets151.5 +/- 89.8bp
Average Position of motif in Background184.5 +/- 129.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGATTCTTGC---
--NNACTTGCCTT
 A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

MBNL1(Znf)/Homo_sapiens-RNCMPT00038-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CGATTCTTGC
---NGCTTGC
 A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C
A C G T A C G T A C G T C G T A A T C G A G T C A C G T A C G T C T A G A T G C

ATHB5(HD-ZIP)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGATTCTTGC
GGTCCAATTATTG-
 A C G T A C G T A C G T A C G T A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C
A C T G A T C G A G C T A T G C A T G C G T C A C G T A A C G T A G C T C G T A A C G T A C G T A C T G A C G T

ATHB-5/MA0110.2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGATTCTTGC
GGTCCAATTATTG-
 A C G T A C G T A C G T A C G T A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C
A C T G A T C G A G C T A T G C A T G C G T C A C G T A A C G T A G C T C G T A A C G T A C G T A C T G A C G T

HAT5/MA0008.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGATTCTTGC
TTCAATTATTGC
 A C G T A C G T A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C
A G C T G A C T A T G C G C T A C G T A A C G T A G C T C G T A A C G T A C G T T C A G T A G C

AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGATTCTTGC----
VHNHTGCTTGNYNNY
 A C G T A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T C A G G C T A A G T C G C A T A C G T A C T G A G T C A C G T A C G T A C T G C A T G A G C T G T A C A C G T A G C T

CG7903(RRM)/Drosophila_melanogaster-RNCMPT00144-PBM/HughesRNA

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CGATTCTTGC--
-----NTTGCGG
 A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T A C G T A C T G A G T C A C T G C T A G

gt/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGATTCTTGC--
--ATTATTACGT
 A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T
A C G T A C G T C G T A C G A T A C G T G C T A A C G T A C G T T C G A A T G C C A T G A C G T

BEAF-32B/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGATTCTTGC
ACGATACT---
 A C G T A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C
C T A G A G T C A C T G C G T A A C G T C G T A A G C T A C G T A C G T A C G T A C G T

Pr_0249(RRM)/Phytophthora_ramorum-RNCMPT00249-PBM/HughesRNA

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CGATTCTTGC---
------TTGCACA
 A G T C A T C G C T G A A G C T G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C T G A