Information for 2-TGTAGACCTAAG (Motif 2)

A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C T G A A C T G A T C G A G C T A G T C A G C T C G T A A T G C C G T A
p-value:1e-35
log p-value:-8.240e+01
Information Content per bp:1.875
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets173.7 +/- 79.7bp
Average Position of motif in Background192.2 +/- 110.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TRB2/MA1073.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGTAGACCTAAG
---TGCCCTAA-
 A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G
A C G T A C G T A C G T G C A T C T A G G T A C A G T C A G T C A G C T C G T A C T G A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTAGACCTAAG
-CNAGGCCT---
 A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTAGACCTAAG---
NNWWAMCCTAAHWNN
 A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G A C G T A C G T A C G T
C G T A C G A T C G A T C G T A C T G A G T C A A G T C A G T C A C G T C G T A C T G A G C A T C G A T C G A T G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTAGACCTAAG
-CTAGGCCT---
 A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

TBF1/MA0403.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGTAGACCTAAG
---AACCCTAA-
 A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G
A C G T A C G T A C G T C G T A T C G A G T A C A G T C A G T C A G C T T C G A T C G A A C G T

P0510F09.23/MA1030.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTAGACCTAAG-
---AACCCTAGAT
 A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G A C G T
A C G T A C G T A C G T G C T A C T G A G T A C G T A C T G A C G C A T C T G A T C A G G T C A G A C T

An_0265(KH)/Aspergillus_nidulans-RNCMPT00265-PBM/HughesRNA

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGTAGACCTAAG
----NACCTAA-
 A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G
A C G T A C G T A C G T A C G T C T G A G T C A A G T C G T A C A G C T G T C A C G T A A C G T

GATA6(C2C2gata)/col200-GATA6-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGACCTAAG
DDTYTAGATCTA--
 A C G T A C G T A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G
C T A G C T G A C G A T A G T C G A C T C T G A T A C G C G T A A C G T A G T C A G C T T C G A A C G T A C G T

SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTAGACCTAAG
--DAAACCTATD
 A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G
A C G T A C G T C G A T C T G A C G T A T C G A A G T C A G T C A C G T C G T A A G C T C G T A

AGP1(GATA)/Nicotiana tabacum/AthaMap

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGTAGACCTAAG
-NTAGATCTGA-
 A C G T A T C G A C G T C T G A A C T G T C G A A T G C A G T C A G C T G T C A C G T A A C T G
A C G T T A C G G A C T C T G A A C T G C G T A A C G T A G T C A C G T T C A G C G T A A C G T