Information for 1-TTCATCGC (Motif 18)

A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C C T A G C G T A A C G T C T A G C G T A C G T A
p-value:1e-19
log p-value:-4.605e+01
Information Content per bp:1.906
Number of Target Sequences with motif132.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif104.7
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets168.6 +/- 98.9bp
Average Position of motif in Background163.7 +/- 95.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHA4(MacIsaac)/Yeast

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TTCATCGC-
CTCATCGCA
 A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C A C G T
G A T C C A G T A T G C T C G A A G C T A G T C A C T G A G T C C G T A

TOD6/MA0350.1/Jaspar

Match Rank:2
Score:0.74
Offset:-8
Orientation:forward strand
Alignment:--------TTCATCGC-----
AGGCACAGCTCATCGCGTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G T A A C T G A C T G G T A C C G T A G A T C C G T A A T C G T A G C A C G T A G T C C G T A A C G T A G T C C A T G T A G C T A C G G A C T G A C T G C A T C A G T

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTCATCGC
NATCATC--
 A C G T A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C
G C T A C G T A A C G T A T G C C G T A A C G T A G T C A C G T A C G T

Rbm47(RRM)/Xenopus_tropicalis-RNCMPT00280-PBM/HughesRNA

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTCATCGC
NATCATC--
 A C G T A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C
C T G A C G T A A C G T A T G C C G T A A C G T A G T C A C G T A C G T

DOT6/MA0351.1/Jaspar

Match Rank:5
Score:0.73
Offset:-8
Orientation:forward strand
Alignment:--------TTCATCGC-----
TTCTGCACCTCATCGCATCCT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A C G T A G T C A C G T C A T G A G T C C G T A A T G C T A G C A C G T A T G C C G T A C A G T A G T C C A T G T G A C T G C A G A C T A T G C A G T C C A G T

TOD6?/SacCer-Promoters/Homer

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTCATCGC
AKCTCATCGC
 A C G T A C G T A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C
G T C A A C T G T A G C A C G T A T G C T C G A C A G T T G A C C A T G G T A C

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTCATCGC
TTTTTATTGC
 A C G T A C G T A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TTCATCGC----
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TTCATCGC----
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

RBP1-LIKE(RRM)/Drosophila_melanogaster-RNCMPT00127-PBM/HughesRNA

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTCATCGC
ATCAACG-
 A C G T C G A T A G T C C G T A A C G T A G T C A C T G A G T C
C G T A C G A T A G T C C G T A C G T A A G T C C T A G A C G T