Information for 5-CACGGTGCTG (Motif 16)

T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G
Reverse Opposite:
G T A C C G T A A C T G G A T C C G T A A G T C A G T C A C T G A C G T A C T G
p-value:1e-21
log p-value:-4.918e+01
Information Content per bp:1.934
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets139.5 +/- 103.3bp
Average Position of motif in Background146.9 +/- 70.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ABI4(2)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:CACGGTGCTG--
--CGGTGCTTCC
 T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G A C G T A C G T
A C G T A C G T A G T C A C T G A C T G A G C T A C T G A T G C A G C T A G C T A G T C A G T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------CACGGTGCTG-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:3
Score:0.64
Offset:-9
Orientation:reverse strand
Alignment:---------CACGGTGCTG--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

abi4/MA0123.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CACGGTGCTG--
--CGGTGCCCCC
 T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G A C G T A C G T
A C G T A C G T A G T C C T A G A T C G A G C T T A C G A T G C A G T C A T G C A G T C A G T C

At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACGGTGCTG
AGKCGGTG---
 A C G T T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G
C G T A C T A G C A G T A G T C A C T G A C T G A G C T A C T G A C G T A C G T A C G T

PFI1695c(RRM)/Plasmodium_falciparum-RNCMPT00203-PBM/HughesRNA

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CACGGTGCTG-
---TGTGCTGG
 T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G A C G T
A C G T A C G T A C G T A C G T A C T G A C G T A C T G G T A C C G A T C T A G A C T G

ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACGGTGCTG
GACGGTGG--
 T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G
C A T G C T G A A G T C A C T G A C T G A G C T A C T G A T C G A C G T A C G T

SWI5/Literature(Harbison)/Yeast

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CACGGTGCTG-
-----GGCTGA
 T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T A G

SWI5(MacIsaac)/Yeast

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CACGGTGCTG---
-----TGCTGGTT
 T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C A C G T C A T G T C A G G A C T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACGGTGCTG-----
CGAACAGTGCTCACTAT
 A C G T A C G T T G A C C G T A A G T C A C T G C T A G A C G T C A T G A G T C A C G T C A T G A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T