Information for 4-CATCCATCCA (Motif 15)

A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A
Reverse Opposite:
A C G T A T C G A C T G C G T A A C G T A C T G A C T G C G T A A C G T A C T G
p-value:1e-21
log p-value:-5.029e+01
Information Content per bp:1.955
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets224.6 +/- 111.5bp
Average Position of motif in Background163.1 +/- 90.6bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAP1/MA0359.1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CATCCATCCA
CACCCATACA
 A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A
T G A C C G T A G A T C A G T C G A T C C T G A G C A T C G T A G A T C G T C A

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CATCCATCCA-
CACCCGTACAT
 A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A A C G T
T G A C T G C A A G T C A G T C G A T C C T A G G A C T T C G A G A T C T G C A A G C T

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CATCCATCCA
CACCCGTACA
 A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A
T G A C T C G A A G T C T A G C A G T C C T A G A G C T T C G A T A G C T G C A

SFP1(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CATCCATCCA-
-ACCCGTACAT
 A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A A C G T
A C G T T C G A G A T C G A T C A G T C C T A G G C A T T C G A G T A C G T C A A G C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CATCCATCCA----
NNCATTCATTCATNNN
 A C G T A C G T A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

RAP1(MacIsaac)/Yeast

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CATCCATCCA-
ACACCCATACAC
 A C G T A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A A C G T
T C G A T G A C T C G A A G T C A T G C A G T C C T G A A G C T C T G A G T A C T G C A G A T C

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CATCCATCCA-
-ACCCGTACAT
 A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A A C G T
A C G T T C G A A G T C A G T C G A T C C T A G G C A T T C G A G T A C T G C A G A C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CATCCATCCA
GYCATCMATCAT
 A C G T A C G T A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

SRSF9(RRM)/Homo_sapiens-RNCMPT00067-PBM/HughesRNA

Match Rank:9
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CATCCATCCA
--TCCTTCC-
 A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A
A C G T A C G T A C G T A T G C A G T C C G A T A G C T A G T C G T A C A C G T

FHL1(MacIsaac)/Yeast

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CATCCATCCA-
-ATCCGTACAT
 A G T C C G T A A C G T G T A C A G T C C G T A A C G T G T A C A T G C C G T A A C G T
A C G T T G C A A G C T G T A C G A T C C T A G A C G T T C G A G A T C G T C A G A C T