Information for 11-GATCTCTACTAA (Motif 13)

C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A
Reverse Opposite:
A C G T A G C T C G T A C T A G A G C T C G T A C T A G G T C A C T A G C T G A A C G T A G T C
p-value:1e-24
log p-value:-5.563e+01
Information Content per bp:1.817
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets133.8 +/- 89.3bp
Average Position of motif in Background212.2 +/- 52.7bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GATCTCTACTAA
--WTTYTACT--
 C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A
A C G T A C G T G C A T A C G T A G C T A G C T A G C T C G T A A G T C A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GATCTCTACTAA
TNNNATGATTTCNNCNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T A C G T

SF1(KH)/Drosophila_melanogaster-RNCMPT00065-PBM/HughesRNA

Match Rank:3
Score:0.63
Offset:7
Orientation:forward strand
Alignment:GATCTCTACTAA--
-------ACTAACN
 C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G T A A G T C T C G A

CG2931(RRM)/Drosophila_melanogaster-RNCMPT00147-PBM/HughesRNA

Match Rank:4
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GATCTCTACTAA-
------AACTAAG
 C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C T G

schlank/MA0193.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GATCTCTACTAA
-----CTACCAA
 C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A G T C A G C T G T C A G T A C A G T C C T G A C T G A

Tb_0252(RRM)/Trypanosoma_brucei-RNCMPT00252-PBM/HughesRNA

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GATCTCTACTAA
---ATCTACT--
 C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A
A C G T A C G T A C G T C G T A G A C T A G T C A C G T C G T A A G T C C G A T A C G T A C G T

QKI(KH)/Homo_sapiens-RNCMPT00047-PBM/HughesRNA

Match Rank:7
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GATCTCTACTAA--
-------ACTAACA
 C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A A G T C T G C A

PFF0320c(RRM)/Plasmodium_falciparum-RNCMPT00235-PBM/HughesRNA

Match Rank:8
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GATCTCTACTAA--
-------ACTAAAC
 C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T C G T A T C G A C G T A G T A C

ARR1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GATCTCTACTAA
-----TTACTAA
 C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A

YAP3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GATCTCTACTAA
-----TTACTAA
 C T A G C G T A A G C T A G T C A C G T A G T C C G A T C T G A A G T C A C G T T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A