Information for 9-CAAATAAGTTGA (Motif 11)

G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A
Reverse Opposite:
A C G T G T A C C G T A G C T A G T A C C G A T C G A T G C T A G A C T A C G T A C G T C A T G
p-value:1e-24
log p-value:-5.708e+01
Information Content per bp:1.777
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets131.4 +/- 98.0bp
Average Position of motif in Background155.9 +/- 97.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HuR(RRM)/Homo_sapiens-RNCMPT00032-PBM/HughesRNA

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CAAATAAGTTGA
AAAATAA-----
 G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A
T C G A C G T A C G T A G T C A G C A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T

OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAAATAAGTTGA-
-VAAAAAGTDAAW
 G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A A C G T
A C G T T G C A C T G A C G T A C G T A C G T A C T G A A C T G A C G T C G T A C G T A G C T A G C T A

bab1/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAAATAAGTTGA
CAATTATATTTA
 G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A
G T A C G T C A C G T A C G A T C G A T C G T A C G A T C G T A C G A T C G A T C A G T G C T A

Nab2p(Znf)/Saccharomyces_cerevisiae-RNCMPT00042-PBM/HughesRNA

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAAATAAGTTGA
-AAAAAAG----
 G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A
A C G T C T G A C T G A C G T A C T G A C G T A C T G A T C A G A C G T A C G T A C G T A C G T

BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAAATAAGTTGA
-NAAAAAGTDA-
 G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A
A C G T T C G A C T G A C G T A C G T A C G T A C G T A A C T G A C G T C G A T C T G A A C G T

Hnrnpr(RRM)/Xenopus_tropicalis-RNCMPT00289-PBM/HughesRNA

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAAATAAGTTGA
-AAAAAAG----
 G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A
A C G T G T C A C G T A C G T A C G T A C G T A G T C A A C T G A C G T A C G T A C G T A C G T

CPEB4(RRM)/Homo_sapiens-RNCMPT00158-PBM/HughesRNA

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAAATAAGTTGA
-AAAAAAG----
 G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A
A C G T C G T A G T C A C G T A C G T A C G T A C G T A C T A G A C G T A C G T A C G T A C G T

RALY(RRM)/Homo_sapiens-RNCMPT00159-PBM/HughesRNA

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAAATAAGTTGA
CAAAAAA-----
 G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A
T G A C T G C A C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CAAATAAGTTGA--
--AAAAAGTWAWWW
 G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A A C G T A C G T
A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C T G A C G T C G A T T C G A G C A T C G A T C G T A

TIAR-3(RRM)/Caenorhabditis_elegans-RNCMPT00005-PBM/HughesRNA

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAAATAAGTTGA
-AAAAAAG----
 G T A C C G T A C G T A C T G A C G A T C G T A C G T A C A T G C G A T A C G T C A T G C G T A
A C G T T G C A C G T A C G T A C G T A C G T A C G T A C T A G A C G T A C G T A C G T A C G T