Information for 3-CCCGGAAGGSGT (Motif 9)


Reverse Opposite:

p-value:1e-2
log p-value:-5.067e+00
Information Content per bp:1.814
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets26.5 +/- 5.9bp
Average Position of motif in Background27.4 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gabpa/MA0062.2/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCCGGAAGGSGT
-CCGGAAGTGGC

ELK4/MA0076.2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CCCGGAAGGSGT
NCCGGAAGTGG-

Eip74EF/MA0026.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCCGGAAGGSGT
-CCGGAAG----

ELF1/MA0473.2/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAAGGSGT
AACCCGGAAGTG--

ELF4/MA0641.1/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAAGGSGT
AACCCGGAAGTG--

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCCGGAAGGSGT
ANCCGGAAGT---

EHF/MA0598.2/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAAGGSGT
AACCCGGAAGTA--

Ets21C/MA0916.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCCGGAAGGSGT
-CCGGAAGT---

ETS(ETS)/Promoter/Homer

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCCGGAAGGSGT
AACCGGAAGT---

ELF3/MA0640.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAAGGSGT
AACCCGGAAGTAA-