Information for 3-GCACCACCCT (Motif 7)


Reverse Opposite:

p-value:1e-2
log p-value:-5.561e+00
Information Content per bp:1.815
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets33.1 +/- 11.8bp
Average Position of motif in Background38.2 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GCACCACCCT
GCCCCGCCCC

Klf4/MA0039.2/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GCACCACCCT
GCCCCACCCA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GCACCACCCT
GCCMCRCCCH

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GCACCACCCT--
NAGCCCCGCCCCCN

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:5
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GCACCACCCT-
-CACCGCCCCC

ALFIN1(HD-PHD)/Medicago sativa/AthaMap

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GCACCACCCT
GCCCCACCTC

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GCACCACCCT
GGCCACACCCA

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCACCACCCT-
GCCCCGCCCCC

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCACCACCCT-
GGCCCCGCCCCC

Run/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GCACCACCCT
-CACCGCC--