Information for 3-ACGAAWCC (Motif 6)


Reverse Opposite:

p-value:1e-2
log p-value:-5.611e+00
Information Content per bp:1.866
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets31.2 +/- 8.7bp
Average Position of motif in Background38.2 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NAC083/MA1043.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--ACGAAWCC
ATACGCAACC

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----ACGAAWCC---
CGTATCGAAACCAAA

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----ACGAAWCC-----
CTGATCGAAACCAAAGT

NAC025/MA0935.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ACGAAWCC
TACGTAAC-

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----ACGAAWCC--
ATAAACCGAAACCAA

che-1/MA0260.1/Jaspar

Match Rank:6
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ACGAAWCC
--GAAACC

MA0260.1_che-1/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ACGAAWCC
--GAAACC

Deaf1/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACGAAWCC
CACGAA---

Deaf1/MA0185.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ACGAAWCC
CACGAA---

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----ACGAAWCC--
CAAAATCGAAACTAA