Information for 2-GCCCGCCCACGC (Motif 5)


Reverse Opposite:

p-value:1e-2
log p-value:-5.611e+00
Information Content per bp:1.866
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets31.0 +/- 8.6bp
Average Position of motif in Background35.6 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR2/MA0472.2/Jaspar

Match Rank:1
Score:0.84
Offset:2
Orientation:forward strand
Alignment:GCCCGCCCACGC-
--ACGCCCACGCA

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GCCCGCCCACGC-
-YCCGCCCACGCN

EGR3/MA0732.1/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GCCCGCCCACGC---
CTACGCCCACGCACT

EGR4/MA0733.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GCCCGCCCACGC----
TTACGCCCACGCATTT

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GCCCGCCCACGC---
-TCCGCCCCCGCATT

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCCACGC-
CCCCCGCCCCCGCC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GCCCGCCCACGC-
---CRCCCACGCA

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGCCCACGC
GCCMCGCCCMCY-

SP3/MA0746.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCCACGC
GCCACGCCCCC--

KLF16/MA0741.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCCACGC
GCCACGCCCCC--