Information for 2-TGACGTAG (Motif 4)


Reverse Opposite:

p-value:1e-2
log p-value:-6.760e+00
Information Content per bp:1.754
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets34.4 +/- 8.1bp
Average Position of motif in Background48.4 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf1/MA0604.1/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-TGACGTAG
ATGACGTA-

SKO1(MacIsaac)/Yeast

Match Rank:2
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TGACGTAG
ATGACGTA-

TGA1A/MA0129.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGACGTAG
TGACGTA-

CST6/MA0286.1/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TGACGTAG
ATGACGTAA

TGA5/MA1047.1/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TGACGTAG
ATGACGTA-

NAC043/MA1045.1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TGACGTAG-
ATTACGTAAA

Crem/MA0609.1/Jaspar

Match Rank:7
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGACGTAG
TATGACGTAA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGACGTAG
TGACGT--

SKO1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGACGTAG
TGACGT--

bZIP910/MA0096.1/Jaspar

Match Rank:10
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGACGTAG
ATGACGT--