Information for 2-CGTCATGGCC (Motif 3)


Reverse Opposite:

p-value:1e-3
log p-value:-7.221e+00
Information Content per bp:1.763
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets28.7 +/- 8.3bp
Average Position of motif in Background20.1 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf3/MA0605.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGTCATGGCC
ACGTCATC---

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGTCATGGCC
-GTCATN---

pho/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGTCATGGCC--
GCCGTTATGGCTTC

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGTCATGGCC
TACGTCAT----

TGA5/MA1047.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGTCATGGCC
NACGTCAT----

SKO1(MacIsaac)/Yeast

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CGTCATGGCC
TACGTCAT----

bZIP910/MA0096.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGTCATGGCC
ACGTCAG----

TGA2/MA1068.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGTCATGGCC
ACGTCATC---

TGA1/MA0588.1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CGTCATGGCC
TNACGTCANCA--

CST6/MA0286.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CGTCATGGCC
TTACGTCAT----