Information for 1-ATGACTCADW (Motif 2)


Reverse Opposite:

p-value:1e-3
log p-value:-7.460e+00
Information Content per bp:1.797
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets27.7 +/- 9.9bp
Average Position of motif in Background25.2 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:ATGACTCADW
ATGASTCATH

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:2
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--ATGACTCADW
NDATGASTCATH

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:3
Score:0.95
Offset:1
Orientation:forward strand
Alignment:ATGACTCADW
-TGACTCA--

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-ATGACTCADW-
NATGACTCATNN

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-ATGACTCADW-
NATGASTCABNN

FOS/MA0476.1/Jaspar

Match Rank:6
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-ATGACTCADW
NATGAGTCANN

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-ATGACTCADW
GATGAGTCAT-

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:8
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-ATGACTCADW-
DATGASTCATNN

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--ATGACTCADW
GGATGACTCAT-

FOSL2/MA0478.1/Jaspar

Match Rank:10
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--ATGACTCADW
GGATGACTCAT-