Information for 5-TGGGGGAGGGGT (Motif 12)


Reverse Opposite:

p-value:1e-1
log p-value:-2.908e+00
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets27.1 +/- 12.4bp
Average Position of motif in Background24.3 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TGGGGGAGGGGT
-GGGGGCGGGGC

SeqBias: polyC-repeat

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TGGGGGAGGGGT
-GGGGGGGGGG-

PB0097.1_Zfp281_1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TGGGGGAGGGGT-
GGGGGGGGGGGGGGA

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGGGGGAGGGGT--
AGGGGGCGGGGCTG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TGGGGGAGGGGT
---GGGGGGGG-

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGGAGGGGT---
NNAGGGGCGGGGTNNA

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TGGGGGAGGGGT
--GGGGNGGGGC

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGGGGGAGGGGT
TGGGGAAGGGCM

KLF16/MA0741.1/Jaspar

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGGGGGAGGGGT
-GGGGGCGTGGC

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGGGGGAGGGGT
GGCGGGGGCGGGGG