Information for 5-TGAGGTHTTT (Motif 8)


Reverse Opposite:

p-value:1e-2
log p-value:-4.852e+00
Information Content per bp:1.827
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets15.1 +/- 2.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB59/MA1042.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGAGGTHTTT
GTTAGGTA---

STF1(bZIP)/Glycine max/AthaMap

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGAGGTHTTT
AATGACGTCATT

CCA1/MA0972.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGAGGTHTTT
--AGATATTT

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGTHTTT
TTTGCGGTTT--

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGAGGTHTTT
TTGCGGTTT--

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGTHTTT
NNTGTGGTTT--

Unknown4/Drosophila-Promoters/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGAGGTHTTT--
TKYGGTATTTTT

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGAGGTHTTT
TGACGT----

SKO1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGAGGTHTTT
TGACGT----

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGAGGTHTTT
AAGATGATGTCAT-