| p-value: | 1e-3 |
| log p-value: | -6.949e+00 |
| Information Content per bp: | 1.790 |
| Number of Target Sequences with motif | 10.0 |
| Percentage of Target Sequences with motif | 2.24% |
| Number of Background Sequences with motif | 0.8 |
| Percentage of Background Sequences with motif | 0.17% |
| Average Position of motif in Targets | 13.5 +/- 2.5bp |
| Average Position of motif in Background | 8.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Rfx1/MA0509.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.83
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GKTGCMAKGG----
GTTGCCATGGNAAC |
|
|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.81
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GKTGCMAKGG--
NNCGTTGCTATGGNN |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 3 |
| Score: | 0.80
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GKTGCMAKGG---
NGTTGCCATGGCAA |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 4 |
| Score: | 0.79
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GKTGCMAKGG
CTGTTGCTAGGS |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 5 |
| Score: | 0.77
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GKTGCMAKGG---
GGTTGCCATGGCAA |
|
|
|
PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.76
| | Offset: | -7
| | Orientation: | reverse strand |
| Alignment: | -------GKTGCMAKGG------
NTNNNNNGTTGCTANGGNNCANA |
|
|
|
RFX1/RFX1_YPD/[](Harbison)/Yeast
| Match Rank: | 7 |
| Score: | 0.75
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | GKTGCMAKGG---
GTTGCCATGGCAA |
|
|
|
RFX1(MacIsaac)/Yeast
| Match Rank: | 8 |
| Score: | 0.74
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GKTGCMAKGG----
GTTGCCATGGCAAC |
|
|
|
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
| Match Rank: | 9 |
| Score: | 0.74
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GKTGCMAKGG-----
GTTGCCATGGCAACM |
|
|
|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
| Match Rank: | 10 |
| Score: | 0.73
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GKTGCMAKGG----
CGGTTGCCATGGCAAC |
|
|
|
