Information for 1-RGRATGASRTGT (Motif 1)


Reverse Opposite:

p-value:1e-4
log p-value:-9.827e+00
Information Content per bp:1.639
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif4.47%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets13.5 +/- 2.9bp
Average Position of motif in Background15.2 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:RGRATGASRTGT
--CATGAC----

Atf3/MA0605.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:RGRATGASRTGT
--GATGACGT--

XBP1/MA0844.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:RGRATGASRTGT----
--GATGACGTGGCANT

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-RGRATGASRTGT
AGGAATG------

bZIP911(2)(bZIP)/Antirrhinum majus/AthaMap

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:RGRATGASRTGT--
--GATGACGTGTAC

bZIP911/MA0097.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:RGRATGASRTGT--
--GATGACGTGGCC

CREB3/MA0638.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:RGRATGASRTGT---
-NGATGACGTGGCAN

bZIP910(1)(bZIP)/Antirrhinum majus/AthaMap

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:RGRATGASRTGT--
--GATGACGTGGCA

toy/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-RGRATGASRTGT
ATGAGTGAGGGG-

TGA1/MA0588.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:RGRATGASRTGT
-TGGTGACGTAA