Information for 4-RGGGGT (Motif 12)


Reverse Opposite:

p-value:1e-1
log p-value:-3.251e+00
Information Content per bp:1.907
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets10.8 +/- 4.5bp
Average Position of motif in Background10.6 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN2/MA0341.1/Jaspar

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:RGGGGT
AGGGG-

MSN4/MA0342.1/Jaspar

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:RGGGGT
AGGGG-

GIS1/MA0306.1/Jaspar

Match Rank:3
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---RGGGGT
NTTAGGGGT

RPH1/MA0372.1/Jaspar

Match Rank:4
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--RGGGGT
TTAGGGGT

ADR1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.84
Offset:0
Orientation:forward strand
Alignment:RGGGGT
NGGAGG

ADR1(MacIsaac)/Yeast

Match Rank:6
Score:0.84
Offset:0
Orientation:forward strand
Alignment:RGGGGT
NGGAGG

RGM1/MA0366.1/Jaspar

Match Rank:7
Score:0.83
Offset:0
Orientation:forward strand
Alignment:RGGGGT
AGGGG-

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.83
Offset:-5
Orientation:reverse strand
Alignment:-----RGGGGT-----
NTNTGGGGGGTCNNNA

MSN4/Literature(Harbison)/Yeast

Match Rank:9
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-RGGGGT
AAGGGGN

ADR1/MA0268.1/Jaspar

Match Rank:10
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-RGGGGT
GTGGGGT