Information for 3-GGGCCG (Motif 11)


Reverse Opposite:

p-value:1e-1
log p-value:-3.586e+00
Information Content per bp:1.937
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif5.15%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets9.6 +/- 3.8bp
Average Position of motif in Background8.5 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SKN7/MA0381.1/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GGGCCG-
-GGCCAT

RDS1/MA0361.1/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCG
NCGGCCG

RDS1(MacIsaac)/Yeast

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGGCCG
CGGCCG

YLL054C/MA0429.1/Jaspar

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCG
TCGGCCG

ERF069/MA0997.1/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GGGCCG---
GCGCCGCCA

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCG
CTAGGCCT

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:7
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGGCCG-
TCGGCCGA

ERF098/MA0999.1/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGGCCG--
CCGCCGCC

ERF11/MA1001.1/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGGCCG----
GCGCCGCCAT

ERF7/MA0993.1/Jaspar

Match Rank:10
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GGGCCG-----
-CGCCGCCATT