| p-value: | 1e-2 |
| log p-value: | -5.181e+00 |
| Information Content per bp: | 1.705 |
| Number of Target Sequences with motif | 10.0 |
| Percentage of Target Sequences with motif | 2.24% |
| Number of Background Sequences with motif | 1.6 |
| Percentage of Background Sequences with motif | 0.36% |
| Average Position of motif in Targets | 13.4 +/- 4.4bp |
| Average Position of motif in Background | 18.5 +/- 1.5bp |
| Strand Bias (log2 ratio + to - strand density) | -0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
SeqBias: GA-repeat
| Match Rank: | 1 |
| Score: | 0.83
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GAAASAGAGA
GAGAGAGAGA |
|
|
|
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer
| Match Rank: | 2 |
| Score: | 0.73
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | GAAASAGAGA
-RGAGAGAG- |
|
|
|
blmp-1/MA0537.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.72
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GAAASAGAGA-
AAAAGTGAAAA |
|
|
|
Trl/dmmpmm(Down)/fly
| Match Rank: | 4 |
| Score: | 0.71
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GAAASAGAGA
GAGAGAGAGAGC |
|
|
|
Trl/dmmpmm(Pollard)/fly
| Match Rank: | 5 |
| Score: | 0.70
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | GAAASAGAGA--
--GAGAGAGCAA |
|
|
|
Trl/MA0205.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.70
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | GAAASAGAGA--
--GAGAGAGCAA |
|
|
|
AZF1/MA0277.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.69
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | GAAASAGAGA
-AAAAAGAAA |
|
|
|
GAGA-repeat/Arabidopsis-Promoters/Homer
| Match Rank: | 8 |
| Score: | 0.69
| | Offset: | 1
| |
|
