Information for 2-AAMTGCAG (Motif 5)


Reverse Opposite:

p-value:1e-2
log p-value:-5.666e+00
Information Content per bp:1.732
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets12.7 +/- 4.0bp
Average Position of motif in Background15.9 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CST6(MacIsaac)/Yeast

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AAMTGCAG
NAAATGCA-

SOK2/MA0385.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAMTGCAG---
ACCTGCAGGCA

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:3
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AAMTGCAG---
---TGCAGGNA

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AAMTGCAG-------
NNNANTGCAGTGCNNTT

PHD1/MA0355.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAMTGCAG--
NGNTGCAGGN

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAMTGCAG------
AAANTGCTGACTNAG

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AAMTGCAG-----
AAAWWTGCTGACWWD

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AAMTGCAG----
TAAAAATGCTGACTT

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAMTGCAG---
AAAATGCTGACT

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AAMTGCAG-------
NAAAANTGCTGACTCAGC