Information for 1-GATATG (Motif 4)


Reverse Opposite:

p-value:1e-2
log p-value:-5.666e+00
Information Content per bp:1.839
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets12.8 +/- 3.1bp
Average Position of motif in Background10.1 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GATATG--
AAGGATATNTN

GZF3/MA0309.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GATATG-
TGATAAGA

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GATATG------
NNNCTGATATCTCNNNN

Optix/MA0199.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GATATG
TGATA--

LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GATATG---
AGATATTTHT

DAL80/MA0289.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GATATG
CGATAAG

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GATATG--
AACATATGTT

Neurog1/MA0623.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GATATG--
ACCATATGGT

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GATATG--
ANCATATGGT

MOT2/MA0379.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GATATG
-ATATA