Information for 1-GTTCKTGT (Motif 1)


Reverse Opposite:

p-value:1e-2
log p-value:-6.279e+00
Information Content per bp:1.689
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets14.2 +/- 3.0bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Deaf1/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GTTCKTGT
-TTCGGG-

Deaf1/MA0185.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GTTCKTGT
-TTCGGG-

SWI4/MA0401.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTTCKTGT
TTTCGCGT

lin-14/MA0261.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTCKTGT
GTGTTC----

MA0261.1_lin-14/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTCKTGT
GTGTTC----

OPI1(MacIsaac)/Yeast

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTTCKTGT
CGGTTCG---

NAC055/MA0937.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTCKTGT
TTACGTGT

OPI1/MA0349.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTCKTGT
CGGTTCG---

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTCKTGT-
ATTTCCTGTN

SWI4(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTCKTGT
TTTTCGCGT