Information for 4-ATGATATC (Motif 9)


Reverse Opposite:

p-value:1e-2
log p-value:-4.852e+00
Information Content per bp:1.856
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets10.8 +/- 2.4bp
Average Position of motif in Background4.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---ATGATATC------
NNNCTGATATCTCNNNN

Optix/MA0199.1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:forward strand
Alignment:ATGATATC
-TGATA--

PH0166.1_Six6_2/Jaspar

Match Rank:3
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----ATGATATC-----
AATNTTGATACCCTATN

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----ATGATATC-----
ANNNATGATACCCCATC

So/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--ATGATATC
TAATGATACG

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----ATGATATC-----
TNNNATGATTTCNNCNN

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----ATGATATC-----
ANANNTGATACCCNATN

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ATGATATC--
AAGGATATNTN

so/MA0246.1/Jaspar

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:ATGATATC
-TGATAC-

PB0105.1_Arid3a_2/Jaspar

Match Rank:10
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----ATGATATC---
NNATNTGATANNNNN