Information for 3-KCTSGSCGGCCC (Motif 8)


Reverse Opposite:

p-value:1e-2
log p-value:-5.617e+00
Information Content per bp:1.680
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets11.5 +/- 3.4bp
Average Position of motif in Background11.2 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IME1(MacIsaac)/Yeast

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:KCTSGSCGGCCC
-CTCGGCGG---

IME1/MA0320.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:KCTSGSCGGCCC
-CTCGGCGG---

CRF4/MA0976.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:KCTSGSCGGCCC
----GGCGGCGC

RAP2-10/MA0980.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:KCTSGSCGGCCC
----GGCGGCGC

ERF105/MA1000.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:KCTSGSCGGCCC
---CGCCGGCA-

ERF098/MA0999.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:KCTSGSCGGCCC
----GGCGGCNN

ERF13/MA1004.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:KCTSGSCGGCCC
---TGGCGGCG-

ERF069/MA0997.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:KCTSGSCGGCCC
---NGGCGGCGN

ERF094/MA1049.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:KCTSGSCGGCCC
---CGGCGGCG-

RAP2-6/MA1052.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:KCTSGSCGGCCC
----GGCGGCGC