Information for 4-TTTTTTTTTT (Motif 14)


Reverse Opposite:

p-value:1e-1
log p-value:-2.446e+00
Information Content per bp:1.541
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif4.92%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif3.09%
Average Position of motif in Targets10.4 +/- 3.9bp
Average Position of motif in Background9.9 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: polyA-repeat

Match Rank:1
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTTTT
TTTTTTTTTT

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTT----
NNNNTTTTTTTTTNAAC

RLR1?/SacCer-Promoters/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TTTTTTTTTT
WTTTTCYYTTTT

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTT----
GNATTTTTTTTTTGANC

hb/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTTTTT
TGTTTTTTTNGT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TTTTTTTTTT-----
-TTTTTTTTCNNGTN

hb/dmmpmm(Down)/fly

Match Rank:7
Score:0.76
Offset:2
Orientation:forward strand
Alignment:TTTTTTTTTT-
--TTTTTTATG

hb/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TTTTTTTTTT
TTTTTT----

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTT--
NTNTTGTTGTTTGTN

hb/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.75
Offset:2
Orientation:forward strand
Alignment:TTTTTTTTTT
--TTTTTTAT