Information for 5-GGCGGGGG (Motif 13)


Reverse Opposite:

p-value:1e-1
log p-value:-3.251e+00
Information Content per bp:1.675
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets11.9 +/- 2.7bp
Average Position of motif in Background15.7 +/- 2.5bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:GGCGGGGG
GGGGGGGG

ZNF740/MA0753.1/Jaspar

Match Rank:2
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GGCGGGGG
GTGGGGGGGG

PB0100.1_Zfp740_1/Jaspar

Match Rank:3
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGGGG---
NANNTGGGGGGGGNGN

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.80
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGGGG---
NAGANTGGCGGGGNGNA

SeqBias: polyC-repeat

Match Rank:5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGCGGGGG--
GGGGGGGGGG

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGGGG
GGGGGCGGGGC

MIG2/MA0338.1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGCGGGGG
NGCGGGG-

PB0097.1_Zfp281_1/Jaspar

Match Rank:8
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGGGG----
GGGGGGGGGGGGGGA

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GGCGGGGG--
AGGGGGCGGGGCTG

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.77
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGGGG
GGGNGGGGGCGGGGC