Information for 2-CGCGYTCTTT (Motif 11)


Reverse Opposite:

p-value:1e-1
log p-value:-4.189e+00
Information Content per bp:1.619
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets11.1 +/- 2.6bp
Average Position of motif in Background13.1 +/- 1.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

lin-14/MA0261.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGCGYTCTTT
-GTGTTC---

MA0261.1_lin-14/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGCGYTCTTT
-GTGTTC---

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGCGYTCTTT---
NTCGCGCGCCTTNNN

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGCGYTCTTT
-GCGCGCTA-

FHY3/MA0557.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGCGYTCTTT
CTCACGCGCTCA

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGCGYTCTTT---
ANCGCGCGCCCTTNN

Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGCGYTCTTT
CCCACGTGCT--

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCGYTCTTT---
TGGCGCGCGCGCCTGA

MBP1/MA0329.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGCGYTCTTT
NNCGCGT-----

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CGCGYTCTTT----
---NNGCTTTANNN