Information for 5-NNNRDGAGNNNR (Motif 10)


Reverse Opposite:

p-value:1e-1
log p-value:-4.500e+00
Information Content per bp:1.336
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets10.6 +/- 4.7bp
Average Position of motif in Background6.4 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ADR1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:NNNRDGAGNNNR
---NGGAGG---

ADR1(MacIsaac)/Yeast

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:NNNRDGAGNNNR
---NGGAGG---

z/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:NNNRDGAGNNNR
----TGAGTG--

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:NNNRDGAGNNNR
----RGAGAGAG

z/dmmpmm(Down)/fly

Match Rank:5
Score:0.67
Offset:4
Orientation:forward strand
Alignment:NNNRDGAGNNNR
----TGAGTG--

z/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:NNNRDGAGNNNR
---TTGAGTG--

z/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:NNNRDGAGNNNR-
---TTGAGTGATT

z/MA0255.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:NNNRDGAGNNNR-
---TTGAGTGATT

Trl/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:NNNRDGAGNNNR-
---GAGAGAGCAA

Trl/MA0205.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:NNNRDGAGNNNR-
---GAGAGAGCAA