Information for 1-CHCCAGGWMT (Motif 1)


Reverse Opposite:

p-value:1e-3
log p-value:-8.352e+00
Information Content per bp:1.730
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets10.3 +/- 2.4bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CHCCAGGWMT--
--CCWGGAATGY

grh/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CHCCAGGWMT
-AGCAGGTA-

pros/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CHCCAGGWMT
---CATGNCT

EmBP-1/MA0128.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CHCCAGGWMT
--CCACGTGT

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CHCCAGGWMT--
--CCWGGAATGY

MF0008.1_MADS_class/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CHCCAGGWMT--
--CCATATATGG

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CHCCAGGWMT
NNNCTTTCCAGGAAA

GATA11/MA1014.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CHCCAGGWMT-
---CAGATCTA

PL0012.1_hlh-2::hlh-8/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CHCCAGGWMT----
NANACCAGATGTTTNN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CHCCAGGWMT--
--NCTGGAATGC