Information for 2-TGBTTHTSTT (Motif 6)


Reverse Opposite:

p-value:1e-2
log p-value:-6.218e+00
Information Content per bp:1.655
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets10.7 +/- 3.0bp
Average Position of motif in Background9.9 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

grh/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGBTTHTSTT
CTGGTTTTAT-

slp1/MA0458.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGBTTHTSTT
TTGTTTACATT

slp1/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGBTTHTSTT
NTGTTTACATT

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGBTTHTSTT
TGTTTATTT-

hb/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGBTTHTSTT--
TGTTTTTTTNGT

GATA3/MA0037.2/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGBTTHTSTT
-TCTTATCT-

FOXF2/MA0030.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGBTTHTSTT--
NTTGTTTACGTTNN

HCM1/MA0317.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGBTTHTSTT
TTGTTTAT---

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGBTTHTSTT
NNCTTATCTN

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGBTTHTSTT-
TTCTTATCTGT