Information for 1-GHASMTGGTA (Motif 2)


Reverse Opposite:

p-value:1e-3
log p-value:-8.625e+00
Information Content per bp:1.677
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets11.4 +/- 3.2bp
Average Position of motif in Background12.9 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GHASMTGGTA---
---CSTGGGAAAD

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GHASMTGGTA---
RGSMTBCTGGGAAAT

Su(H)/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GHASMTGGTA-
----ATGAGAA

SWI5/MA0402.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GHASMTGGTA
--TGCTGGTT

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GHASMTGGTA
--TGCTGGT-

HSF1/MA0319.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GHASMTGGTA--
----ATGGAACA

GTS1(MacIsaac)/Yeast

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GHASMTGGTA
----TTGGTA

ACE2/MA0267.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GHASMTGGTA
--TGCTGGT-

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GHASMTGGTA
AAGCACATGG--

Tag/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GHASMTGGTA-
----CAGGTAG