Information for 4-ATAGTAATGTGA (Motif 14)


Reverse Opposite:

p-value:1e-1
log p-value:-3.433e+00
Information Content per bp:1.936
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif16.49%
Number of Background Sequences with motif57.7
Percentage of Background Sequences with motif12.20%
Average Position of motif in Targets10.6 +/- 3.3bp
Average Position of motif in Background10.9 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

br-Z2/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATAGTAATGTGA
-TAGTAA-----

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ATAGTAATGTGA---
---GWAAYHTGABMC

PL0005.1_hlh-30/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATAGTAATGTGA----
NNNNGTCACGTGATNNN

Antp/dmmpmm(Down)/fly

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATAGTAATGTGA
ATAAATAATAAT----

ARR1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATAGTAATGTGA
TTAGTAA-----

YAP3/Literature(Harbison)/Yeast

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATAGTAATGTGA
TTAGTAA-----

YAP5/Literature(Harbison)/Yeast

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATAGTAATGTGA
TTAGTAA-----

YAP6/Literature(Harbison)/Yeast

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATAGTAATGTGA
TTAGTAA-----

YAP3(MacIsaac)/Yeast

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATAGTAATGTGA
TTAGTAA-----

DOF2.5/MA0977.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATAGTAATGTGA
---AAAAAGTG-