Information for 4-NNNMGGCNBH (Motif 12)


Reverse Opposite:

p-value:1e-1
log p-value:-4.170e+00
Information Content per bp:1.327
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif12.26%
Number of Background Sequences with motif37.6
Percentage of Background Sequences with motif7.95%
Average Position of motif in Targets11.2 +/- 3.9bp
Average Position of motif in Background11.9 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF11/MA1001.1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-NNNMGGCNBH
NTGNCGGCGN-

ERF112/MA1002.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:NNNMGGCNBH
TGGCGGCGGN

ERF7/MA0993.1/Jaspar

Match Rank:3
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--NNNMGGCNBH
NNTGGCGGCG--

ERF069/MA0997.1/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:NNNMGGCNBH
NGGCGGCGN-

ERF098/MA0999.1/Jaspar

Match Rank:5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:NNNMGGCNBH
-GGCGGCNN-

ERF8/MA0994.1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--NNNMGGCNBH
NNTGGCGGCG--

CRF4/MA0976.1/Jaspar

Match Rank:7
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:NNNMGGCNBH
-GGCGGCGC-

ERF096/MA0998.1/Jaspar

Match Rank:8
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-NNNMGGCNBH
NNGGCGGCGN-

ERF4/MA0992.1/Jaspar

Match Rank:9
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:NNNMGGCNBH
-GGCGGCGG-

STP1/MA0394.1/Jaspar

Match Rank:10
Score:0.79
Offset:1
Orientation:forward strand
Alignment:NNNMGGCNBH
-TGCGGCGC-