Information for 3-NNNHNSDVDBYD (Motif 11)


Reverse Opposite:

p-value:1e-2
log p-value:-5.038e+00
Information Content per bp:1.330
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif10.57%
Number of Background Sequences with motif28.0
Percentage of Background Sequences with motif5.93%
Average Position of motif in Targets11.9 +/- 3.6bp
Average Position of motif in Background11.2 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP911/MA0097.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-NNNHNSDVDBYD
GATGACGTGGCC-

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:NNNHNSDVDBYD--
GTGCCGTGTGCAAA

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:NNNHNSDVDBYD-
-----GTGACCTT

bZIP911(1)(bZIP)/Antirrhinum majus/AthaMap

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-NNNHNSDVDBYD
GGTGACGTGGCC-

RTG3/Literature(Harbison)/Yeast

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:NNNHNSDVDBYD
-----GTGACC-

HAC1(MacIsaac)/Yeast

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:NNNHNSDVDBYD
--TACGTGGCCT

MGA1/MA0336.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-NNNHNSDVDBYD--------
NTTNNAGTGTTCTATANNNNN

lin-14/MA0261.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:NNNHNSDVDBYD
-----GTGTTC-

MA0261.1_lin-14/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:NNNHNSDVDBYD
-----GTGTTC-

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:NNNHNSDVDBYD
-TGCTGTGATTT