Information for 1-MWVADGDVWSCY (Motif 1)


Reverse Opposite:

p-value:1e-4
log p-value:-9.645e+00
Information Content per bp:1.411
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.59%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets11.8 +/- 3.6bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

sna/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.51
Offset:0
Orientation:forward strand
Alignment:MWVADGDVWSCY
ANCAGGTGG---

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----MWVADGDVWSCY
TGACCTNTAGTAACCC

AZF1/MA0277.1/Jaspar

Match Rank:3
Score:0.49
Offset:0
Orientation:forward strand
Alignment:MWVADGDVWSCY
AAAAAGAAA---

Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer

Match Rank:4
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:MWVADGDVWSCY
-WCAGGTAGVM-

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-MWVADGDVWSCY----
ATAAATGACACCTATCA

GCR1/MA0304.1/Jaspar

Match Rank:6
Score:0.47
Offset:4
Orientation:forward strand
Alignment:MWVADGDVWSCY
----TGGAAGCC

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.47
Offset:0
Orientation:forward strand
Alignment:MWVADGDVWSCY
NACAGGAAAT--

NAC92/MA1044.1/Jaspar

Match Rank:8
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-MWVADGDVWSCY
TAACACGCCACA-

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.46
Offset:0
Orientation:forward strand
Alignment:MWVADGDVWSCY-----
TACGAGACTCCTCTAAC

RTG3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:MWVADGDVWSCY
-----GTGACC-