Information for 1-ACTTACGC (Motif 9)


Reverse Opposite:

p-value:1e0
log p-value:-1.109e+00
Information Content per bp:1.530
Number of Target Sequences with motif131.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif124.0
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets480.5 +/- 254.6bp
Average Position of motif in Background489.0 +/- 255.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ACTTACGC
ATACTTA---

ETS(ETS)/Promoter/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACTTACGC--
ACTTCCGGTT

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACTTACGC--
ACTTCCGGNT

STB2(MacIsaac)/Yeast

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACTTACGC-
-NTTACCCG

bap/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACTTACGC
NCACTTAANN

MA0211.1_bap/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACTTACGC
CACTTAA--

MA0062.2_GABPA/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACTTACGC
NCCACTTCCGG

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACTTACGC----
NNACTTCCTCTTNN

cad/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACTTACGC
-NTTANGC

PB0011.1_Ehf_1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACTTACGC-----
TNACTTCCGGNTNNN