Information for 3-TAACCGTA (Motif 11)


Reverse Opposite:

p-value:1e0
log p-value:-1.069e+00
Information Content per bp:1.530
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif75.0
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets485.4 +/- 278.3bp
Average Position of motif in Background484.6 +/- 280.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ovo/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TAACCGTA
TAACGGT-

MA0126.1_ovo/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TAACCGTA
AGTAACAGT-

MA0239.1_prd/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TAACCGTA
AGTAACAGT-

ovo/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TAACCGTA
AGTAACNGT-

MA0242.1_run::Bgb/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TAACCGTA-
TAACCGCAA

MA0054.1_myb.Ph3/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TAACCGTA-
TAACCGTTT

MYB.PH3(1)(MYB)/Petunia hybrida/AthaMap

Match Rank:7
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TAACCGTA----
GTAACCGTTTTTT

AtMYB77(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TAACCGTA----
GTAACCGTCANTN

MA0575.1_AtMYB77/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TAACCGTA----
GTAACCGTCANTN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TAACCGTA-
-AACCGANA