Information for 4-TAGATCGAAC (Motif 9)


Reverse Opposite:

p-value:1e0
log p-value:-1.934e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.01%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets768.5 +/- 371.3bp
Average Position of motif in Background840.6 +/- 139.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0293.1_ECM23/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TAGATCGAAC
AAAGATCTAAA

OPI1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TAGATCGAAC-
----TCGAACC

MA0301.1_GAT3/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAGATCGAAC
-AGATCTACA

MA0389.1_SRD1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAGATCGAAC
GTAGATCT---

MA0302.1_GAT4/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAGATCGAAC
AAAGATCTAAA

AGP1(GATA)/Nicotiana tabacum/AthaMap

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAGATCGAAC
TCAGATCTAC-

MA0319.1_HSF1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TAGATCGAAC-
---ATGGAACA

exd/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAGATCGAAC
TAAAACAAAA

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAGATCGAAC-----
NANAGATCAAAGGGNNN

MA0434.1_YPR013C/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGATCGAAC
TGTAGATCA---